Detailed information of SNP:



SNP ID: sf0627910379(Gbrowse)

Chromosome: chr06

Position: 27910379
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1407 91.40% 8.60%
All Indica796 86.18% 13.82%
All Japonica497 99.60% 0.40%
Aus58 84.48% 15.52%
Indica I374 91.71% 8.29%
Indica II213 98.59% 1.41%
Indica Intermediate209 63.64% 36.36%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0627910379 G->A INTERGENIC None