Detailed information of SNP:
SNP ID:
sf0627971944(Gbrowse)
Chromosome: chr06 Position: 27971944 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1416 | 93.86% | 6.14% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 494 | 83.60% | 16.40% |
Aus | 67 | 94.03% | 5.97% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 332 | 75.60% | 24.40% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0627971944 | G->T | INTERGENIC | None |