Detailed information of SNP:



SNP ID: sf0627971944(Gbrowse)

Chromosome: chr06

Position: 27971944
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1416 93.86% 6.14%
All Indica799 100.00% 0.00%
All Japonica494 83.60% 16.40%
Aus67 94.03% 5.97%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica332 75.60% 24.40%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0627971944 G->T INTERGENIC None