Detailed information of SNP:



SNP ID: sf0628758428(Gbrowse)

Chromosome: chr06

Position: 28758428
Major allele: T

Minor allele: G

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1321 98.11% 1.89%
All Indica787 100.00% 0.00%
All Japonica414 93.96% 6.04%
Aus67 100.00% 0.00%
Indica I364 100.00% 0.00%
Indica II212 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica277 93.14% 6.86%
Tropical Japonica81 100.00% 0.00%
Japonica Intermediate56 89.29% 10.71%
Group VI/Aromatic14 100.00% 0.00%
Intermediate39 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0628758428 T->G INTERGENIC None