Detailed information of SNP:
SNP ID:
sf0630076330(Gbrowse)
Chromosome: chr06 Position: 30076330 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
---|---|---|---|
All | 1404 | 92.74% | 7.26% |
All Indica | 788 | 87.94% | 12.06% |
All Japonica | 496 | 99.19% | 0.81% |
Aus | 65 | 96.92% | 3.08% |
Indica I | 370 | 90.00% | 10.00% |
Indica II | 211 | 97.63% | 2.37% |
Indica Intermediate | 207 | 74.40% | 25.60% |
Temperate Japonica | 334 | 100.00% | 0.00% |
Tropical Japonica | 94 | 96.81% | 3.19% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0630076330 | A->C | INTERGENIC | None |