Detailed information of SNP:



SNP ID: sf0631102108(Gbrowse)

Chromosome: chr06

Position: 31102108
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 93.23% 6.77%
All Indica799 100.00% 0.00%
All Japonica497 80.89% 19.11%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 74.63% 25.37%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 86.76% 13.24%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0631102108 C->T INTERGENIC None