Detailed information of SNP:
|
SNP ID:
sf0631246244(Gbrowse)
Chromosome: chr06 Position: 31246244 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1401 | 96.57% | 3.43% |
| All Indica | 786 | 94.91% | 5.09% |
| All Japonica | 492 | 98.98% | 1.02% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 368 | 94.57% | 5.43% |
| Indica II | 208 | 94.71% | 5.29% |
| Indica Intermediate | 210 | 95.71% | 4.29% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 91 | 96.70% | 3.30% |
| Japonica Intermediate | 66 | 98.48% | 1.52% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0631246244 | G->A | INTERGENIC | None |