Detailed information of SNP:



SNP ID: sf0700361980(Gbrowse)

Chromosome: chr07

Position: 361980
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 50.46% 49.54%
All Indica799 83.85% 16.15%
All Japonica495 5.86% 94.14%
Aus67 5.97% 94.03%
Indica I375 97.33% 2.67%
Indica II213 57.75% 42.25%
Indica Intermediate211 86.26% 13.74%
Temperate Japonica335 3.28% 96.72%
Tropical Japonica92 18.48% 81.52%
Japonica Intermediate68 1.47% 98.53%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 26.19% 73.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0700361980 A->G INTERGENIC None