Detailed information of SNP:



SNP ID: sf0700922552(Gbrowse)

Chromosome: chr07

Position: 922552
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1417 94.07% 5.93%
All Indica797 91.72% 8.28%
All Japonica497 96.78% 3.22%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II212 75.94% 24.06%
Indica Intermediate210 92.86% 7.14%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 84.04% 15.96%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0700922552 C->T INTERGENIC None