Detailed information of SNP:
SNP ID:
sf0701083978(Gbrowse)
Chromosome: chr07 Position: 1083978 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1418 | 95.91% | 4.09% |
All Indica | 798 | 99.12% | 0.88% |
All Japonica | 497 | 99.40% | 0.60% |
Aus | 67 | 29.85% | 70.15% |
Indica I | 375 | 98.67% | 1.33% |
Indica II | 213 | 99.53% | 0.47% |
Indica Intermediate | 210 | 99.52% | 0.48% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 96.81% | 3.19% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 92.86% | 7.14% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0701083978 | A->G | INTERGENIC | None |