Detailed information of SNP:
|
SNP ID:
sf0701810826(Gbrowse)
Chromosome: chr07 Position: 1810826 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1338 | 95.67% | 4.33% |
| All Indica | 722 | 92.11% | 7.89% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 322 | 88.20% | 11.80% |
| Indica II | 205 | 99.02% | 0.98% |
| Indica Intermediate | 195 | 91.28% | 8.72% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0701810826 | C->G | INTERGENIC | None |