Detailed information of SNP:



SNP ID: sf0702246113(Gbrowse)

Chromosome: chr07

Position: 2246113
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1390 97.63% 2.37%
All Indica796 99.37% 0.63%
All Japonica497 100.00% 0.00%
Aus45 37.78% 62.22%
Indica I373 99.73% 0.27%
Indica II212 99.06% 0.94%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic13 100.00% 0.00%
Intermediate39 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0702246113 A->T INTERGENIC None