Detailed information of SNP:



SNP ID: sf0703263097(Gbrowse)

Chromosome: chr07

Position: 3263097
Major allele: G

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1416 55.72% 44.28%
All Indica798 89.35% 10.65%
All Japonica497 0.40% 99.60%
Aus67 79.10% 20.90%
Indica I375 87.47% 12.53%
Indica II213 98.12% 1.88%
Indica Intermediate210 83.81% 16.19%
Temperate Japonica335 0.00% 100.00%
Tropical Japonica94 1.06% 98.94%
Japonica Intermediate68 1.47% 98.53%
Group VI/Aromatic14 7.14% 92.86%
Intermediate40 50.00% 50.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0703263097 T->G INTERGENIC None