Detailed information of SNP:



SNP ID: sf0704857081(Gbrowse)

Chromosome: chr07

Position: 4857081
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1397 95.56% 4.44%
All Indica799 99.50% 0.50%
All Japonica489 94.27% 5.73%
Aus54 74.07% 25.93%
Indica I375 100.00% 0.00%
Indica II213 98.12% 1.88%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica333 98.80% 1.20%
Tropical Japonica88 77.27% 22.73%
Japonica Intermediate68 94.12% 5.88%
Group VI/Aromatic14 7.14% 92.86%
Intermediate41 92.68% 7.32%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0704857081 C->A INTERGENIC None