Detailed information of SNP:
|
SNP ID:
sf0706097978(Gbrowse)
Chromosome: chr07 Position: 6097978 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1366 | 87.12% | 12.88% |
| All Indica | 791 | 80.15% | 19.85% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 27 | 48.15% | 51.85% |
| Indica I | 375 | 72.53% | 27.47% |
| Indica II | 210 | 99.52% | 0.48% |
| Indica Intermediate | 206 | 74.27% | 25.73% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 38 | 86.84% | 13.16% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0706097978 | G->A | INTERGENIC | None |