Detailed information of SNP:



SNP ID: sf0706636818(Gbrowse)

Chromosome: chr07

Position: 6636818
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 97.82% 2.18%
All Indica799 99.75% 0.25%
All Japonica497 94.37% 5.63%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 92.54% 7.46%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0706636818 C->T INTERGENIC None