Detailed information of SNP:
|
SNP ID:
sf0707214926(Gbrowse)
Chromosome: chr07 Position: 7214926 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1350 | 97.85% | 2.15% |
| All Indica | 732 | 96.04% | 3.96% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 331 | 94.56% | 5.44% |
| Indica II | 204 | 99.51% | 0.49% |
| Indica Intermediate | 197 | 94.92% | 5.08% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0707214926 | G->A | INTERGENIC | None |