Detailed information of SNP:
|
SNP ID:
sf0707710783(Gbrowse)
Chromosome: chr07 Position: 7710783 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 51.10% | 48.90% |
| All Indica | 797 | 87.95% | 12.05% |
| All Japonica | 495 | 1.01% | 98.99% |
| Aus | 67 | 5.97% | 94.03% |
| Indica I | 374 | 95.72% | 4.28% |
| Indica II | 212 | 88.68% | 11.32% |
| Indica Intermediate | 211 | 73.46% | 26.54% |
| Temperate Japonica | 334 | 0.90% | 99.10% |
| Tropical Japonica | 93 | 1.08% | 98.92% |
| Japonica Intermediate | 68 | 1.47% | 98.53% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 30.95% | 69.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0707710783 | G->A | INTERGENIC | None |