Detailed information of SNP:
|
SNP ID:
sf0707835864(Gbrowse)
Chromosome: chr07 Position: 7835864 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1360 | 90.59% | 9.41% |
| All Indica | 741 | 82.86% | 17.14% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 331 | 69.18% | 30.82% |
| Indica II | 206 | 97.57% | 2.43% |
| Indica Intermediate | 204 | 90.20% | 9.80% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0707835864 | A->G | INTERGENIC | None |