Detailed information of SNP:
|
SNP ID:
sf0707852846(Gbrowse)
Chromosome: chr07 Position: 7852846 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1404 | 97.29% | 2.71% |
| All Indica | 785 | 95.54% | 4.46% |
| All Japonica | 496 | 99.60% | 0.40% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 370 | 95.14% | 4.86% |
| Indica II | 206 | 95.63% | 4.37% |
| Indica Intermediate | 209 | 96.17% | 3.83% |
| Temperate Japonica | 334 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0707852846 | A->G | INTERGENIC | None |