Detailed information of SNP:
|
SNP ID:
sf0708133635(Gbrowse)
Chromosome: chr07 Position: 8133635 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1411 | 93.69% | 6.31% |
| All Indica | 799 | 99.37% | 0.63% |
| All Japonica | 493 | 90.47% | 9.53% |
| Aus | 65 | 44.62% | 55.38% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 333 | 99.10% | 0.90% |
| Tropical Japonica | 92 | 57.61% | 42.39% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 12 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0708133635 | C->G | INTERGENIC | None |