Detailed information of SNP:
|
SNP ID:
sf0708903936(Gbrowse)
Chromosome: chr07 Position: 8903936 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1316 | 81.23% | 18.77% |
| All Indica | 696 | 65.52% | 34.48% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 290 | 39.66% | 60.34% |
| Indica II | 210 | 92.86% | 7.14% |
| Indica Intermediate | 196 | 74.49% | 25.51% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0708903936 | G->A | INTERGENIC | None |