Detailed information of SNP:
|
SNP ID:
sf0709077884(Gbrowse)
Chromosome: chr07 Position: 9077884 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1356 | 97.05% | 2.95% |
| All Indica | 791 | 99.62% | 0.38% |
| All Japonica | 444 | 91.67% | 8.33% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 204 | 99.02% | 0.98% |
| Temperate Japonica | 302 | 87.75% | 12.25% |
| Tropical Japonica | 81 | 100.00% | 0.00% |
| Japonica Intermediate | 61 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0709077884 | G->A | INTERGENIC | None |