Detailed information of SNP:
|
SNP ID:
sf0709349061(Gbrowse)
Chromosome: chr07 Position: 9349061 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 57.88% | 42.12% |
| All Indica | 797 | 95.36% | 4.64% |
| All Japonica | 497 | 3.42% | 96.58% |
| Aus | 67 | 26.87% | 73.13% |
| Indica I | 374 | 96.79% | 3.21% |
| Indica II | 213 | 92.96% | 7.04% |
| Indica Intermediate | 210 | 95.24% | 4.76% |
| Temperate Japonica | 335 | 3.88% | 96.12% |
| Tropical Japonica | 94 | 2.13% | 97.87% |
| Japonica Intermediate | 68 | 2.94% | 97.06% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 40 | 60.00% | 40.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0709349061 | A->G | INTERGENIC | None |