Detailed information of SNP:



SNP ID: sf0709447538(Gbrowse)

Chromosome: chr07

Position: 9447538
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1362 98.16% 1.84%
All Indica744 96.77% 3.23%
All Japonica495 100.00% 0.00%
Aus67 98.51% 1.49%
Indica I345 95.65% 4.35%
Indica II199 99.50% 0.50%
Indica Intermediate200 96.00% 4.00%
Temperate Japonica334 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0709447538 G->A INTERGENIC None