Detailed information of SNP:



SNP ID: sf0709499964(Gbrowse)

Chromosome: chr07

Position: 9499964
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 70.19% 29.81%
All Indica799 99.25% 0.75%
All Japonica497 28.57% 71.43%
Aus67 35.82% 64.18%
Indica I375 100.00% 0.00%
Indica II213 98.59% 1.41%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 32.54% 67.46%
Tropical Japonica94 8.51% 91.49%
Japonica Intermediate68 36.76% 63.24%
Group VI/Aromatic14 35.71% 64.29%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0709499964 A->G INTERGENIC None