Detailed information of SNP:



SNP ID: sf0710013858(Gbrowse)

Chromosome: chr07

Position: 10013858
Major allele: C

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1410 92.41% 7.59%
All Indica798 99.75% 0.25%
All Japonica490 80.20% 19.80%
Aus66 96.97% 3.03%
Indica I375 100.00% 0.00%
Indica II212 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica330 79.09% 20.91%
Tropical Japonica93 84.95% 15.05%
Japonica Intermediate67 79.10% 20.90%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0710013858 A->C INTERGENIC None