Detailed information of SNP:
|
SNP ID:
sf0710291743(Gbrowse)
Chromosome: chr07 Position: 10291743 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1318 | 56.75% | 43.25% |
| All Indica | 701 | 23.97% | 76.03% |
| All Japonica | 496 | 98.79% | 1.21% |
| Aus | 67 | 77.61% | 22.39% |
| Indica I | 304 | 23.36% | 76.64% |
| Indica II | 205 | 14.15% | 85.85% |
| Indica Intermediate | 192 | 35.42% | 64.58% |
| Temperate Japonica | 335 | 98.81% | 1.19% |
| Tropical Japonica | 93 | 98.92% | 1.08% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 60.00% | 40.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0710291743 | G->A | INTERGENIC | None |