Detailed information of SNP:
|
SNP ID:
sf0710375392(Gbrowse)
Chromosome: chr07 Position: 10375392 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 93.58% | 6.42% |
| All Indica | 798 | 99.12% | 0.88% |
| All Japonica | 497 | 85.11% | 14.89% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 375 | 99.47% | 0.53% |
| Indica II | 212 | 98.11% | 1.89% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 335 | 77.91% | 22.09% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0710375392 | G->A | INTERGENIC | None |