Detailed information of SNP:
|
SNP ID:
sf0710468445(Gbrowse)
Chromosome: chr07 Position: 10468445 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 76.06% | 23.94% |
| All Indica | 799 | 99.25% | 0.75% |
| All Japonica | 490 | 41.63% | 58.37% |
| Aus | 67 | 50.75% | 49.25% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 98.59% | 1.41% |
| Indica Intermediate | 211 | 98.58% | 1.42% |
| Temperate Japonica | 328 | 57.32% | 42.68% |
| Tropical Japonica | 94 | 6.38% | 93.62% |
| Japonica Intermediate | 68 | 14.71% | 85.29% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 69.05% | 30.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0710468445 | A->G | INTERGENIC | None |