Detailed information of SNP:
|
SNP ID:
sf0710829844(Gbrowse)
Chromosome: chr07 Position: 10829844 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1410 | 96.95% | 3.05% |
| All Indica | 798 | 98.50% | 1.50% |
| All Japonica | 494 | 94.94% | 5.06% |
| Aus | 65 | 95.38% | 4.62% |
| Indica I | 375 | 98.93% | 1.07% |
| Indica II | 213 | 98.59% | 1.41% |
| Indica Intermediate | 210 | 97.62% | 2.38% |
| Temperate Japonica | 333 | 93.39% | 6.61% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 39 | 94.87% | 5.13% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0710829844 | A->G | INTERGENIC | None |