Detailed information of SNP:
|
SNP ID:
sf0711013581(Gbrowse)
Chromosome: chr07 Position: 11013581 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1387 | 96.32% | 3.68% |
| All Indica | 796 | 99.62% | 0.38% |
| All Japonica | 470 | 90.21% | 9.79% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 208 | 98.56% | 1.44% |
| Temperate Japonica | 310 | 85.48% | 14.52% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 66 | 98.48% | 1.52% |
| Group VI/Aromatic | 13 | 92.31% | 7.69% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0711013581 | G->A | INTERGENIC | None |