Detailed information of SNP:
|
SNP ID:
sf0711419055(Gbrowse)
Chromosome: chr07 Position: 11419055 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1398 | 91.13% | 8.87% |
| All Indica | 778 | 87.66% | 12.34% |
| All Japonica | 497 | 98.59% | 1.41% |
| Aus | 67 | 80.60% | 19.40% |
| Indica I | 365 | 87.95% | 12.05% |
| Indica II | 208 | 85.10% | 14.90% |
| Indica Intermediate | 205 | 89.76% | 10.24% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 94.68% | 5.32% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0711419055 | G->A | INTERGENIC | None |