Detailed information of SNP:
|
SNP ID:
sf0711740550(Gbrowse)
Chromosome: chr07 Position: 11740550 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1284 | 97.12% | 2.88% |
| All Indica | 781 | 99.10% | 0.90% |
| All Japonica | 388 | 94.59% | 5.41% |
| Aus | 63 | 96.83% | 3.17% |
| Indica I | 374 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 194 | 96.39% | 3.61% |
| Temperate Japonica | 233 | 90.99% | 9.01% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 62 | 100.00% | 0.00% |
| Group VI/Aromatic | 10 | 30.00% | 70.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0711740550 | G->A | INTERGENIC | None |