Detailed information of SNP:
|
SNP ID:
sf0712129171(Gbrowse)
Chromosome: chr07 Position: 12129171 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1414 | 95.83% | 4.17% |
| All Indica | 795 | 96.35% | 3.65% |
| All Japonica | 497 | 94.57% | 5.43% |
| Aus | 66 | 98.48% | 1.52% |
| Indica I | 372 | 95.97% | 4.03% |
| Indica II | 213 | 97.65% | 2.35% |
| Indica Intermediate | 210 | 95.71% | 4.29% |
| Temperate Japonica | 335 | 92.84% | 7.16% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0712129171 | A->G | INTERGENIC | None |