Detailed information of SNP:
|
SNP ID:
sf0713246691(Gbrowse)
Chromosome: chr07 Position: 13246691 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
|---|---|---|---|
| All | 1398 | 95.28% | 4.72% |
| All Indica | 782 | 91.56% | 8.44% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 367 | 86.10% | 13.90% |
| Indica II | 209 | 98.56% | 1.44% |
| Indica Intermediate | 206 | 94.17% | 5.83% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0713246691 | A->C | INTERGENIC | None |