Detailed information of SNP:
|
SNP ID:
sf0713441768(Gbrowse)
Chromosome: chr07 Position: 13441768 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1312 | 92.91% | 7.09% |
| All Indica | 704 | 95.31% | 4.69% |
| All Japonica | 494 | 88.46% | 11.54% |
| Aus | 63 | 100.00% | 0.00% |
| Indica I | 317 | 93.38% | 6.62% |
| Indica II | 194 | 100.00% | 0.00% |
| Indica Intermediate | 193 | 93.78% | 6.22% |
| Temperate Japonica | 333 | 84.38% | 15.62% |
| Tropical Japonica | 94 | 95.74% | 4.26% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 91.89% | 8.11% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0713441768 | G->A | INTERGENIC | None |