Detailed information of SNP:
|
SNP ID:
sf0713834513(Gbrowse)
Chromosome: chr07 Position: 13834513 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1408 | 94.74% | 5.26% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 486 | 85.19% | 14.81% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 325 | 79.38% | 20.62% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0713834513 | A->G | INTERGENIC | None |