Detailed information of SNP:
|
SNP ID:
sf0714094306(Gbrowse)
Chromosome: chr07 Position: 14094306 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1356 | 60.77% | 39.23% |
| All Indica | 770 | 82.73% | 17.27% |
| All Japonica | 464 | 22.84% | 77.16% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 362 | 82.32% | 17.68% |
| Indica II | 210 | 84.29% | 15.71% |
| Indica Intermediate | 198 | 81.82% | 18.18% |
| Temperate Japonica | 309 | 25.24% | 74.76% |
| Tropical Japonica | 94 | 6.38% | 93.62% |
| Japonica Intermediate | 61 | 36.07% | 63.93% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 41 | 53.66% | 46.34% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714094306 | A->G | INTERGENIC | None |