Detailed information of SNP:
|
SNP ID:
sf0714139426(Gbrowse)
Chromosome: chr07 Position: 14139426 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1374 | 94.69% | 5.31% |
| All Indica | 782 | 96.55% | 3.45% |
| All Japonica | 474 | 93.88% | 6.12% |
| Aus | 63 | 74.60% | 25.40% |
| Indica I | 368 | 96.20% | 3.80% |
| Indica II | 205 | 95.61% | 4.39% |
| Indica Intermediate | 209 | 98.09% | 1.91% |
| Temperate Japonica | 326 | 99.69% | 0.31% |
| Tropical Japonica | 82 | 71.95% | 28.05% |
| Japonica Intermediate | 66 | 92.42% | 7.58% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714139426 | G->A | INTERGENIC | None |