Detailed information of SNP:
|
SNP ID:
sf0714178501(Gbrowse)
Chromosome: chr07 Position: 14178501 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 98.13% | 1.87% |
| All Indica | 773 | 96.64% | 3.36% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 361 | 95.57% | 4.43% |
| Indica II | 206 | 99.51% | 0.49% |
| Indica Intermediate | 206 | 95.63% | 4.37% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714178501 | G->A | INTERGENIC | None |