Detailed information of SNP:
|
SNP ID:
sf0714206097(Gbrowse)
Chromosome: chr07 Position: 14206097 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1303 | 89.72% | 10.28% |
| All Indica | 693 | 87.01% | 12.99% |
| All Japonica | 494 | 92.31% | 7.69% |
| Aus | 65 | 96.92% | 3.08% |
| Indica I | 336 | 91.67% | 8.33% |
| Indica II | 176 | 84.66% | 15.34% |
| Indica Intermediate | 181 | 80.66% | 19.34% |
| Temperate Japonica | 335 | 98.81% | 1.19% |
| Tropical Japonica | 92 | 63.04% | 36.96% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 38 | 89.47% | 10.53% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714206097 | C->G | INTERGENIC | None |