Detailed information of SNP:
|
SNP ID:
sf0714214243(Gbrowse)
Chromosome: chr07 Position: 14214243 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1407 | 98.51% | 1.49% |
| All Indica | 799 | 99.50% | 0.50% |
| All Japonica | 491 | 97.96% | 2.04% |
| Aus | 64 | 98.44% | 1.56% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 98.10% | 1.90% |
| Temperate Japonica | 329 | 97.57% | 2.43% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 11 | 45.45% | 54.55% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714214243 | G->A | INTERGENIC | None |