Detailed information of SNP:
|
SNP ID:
sf0714414551(Gbrowse)
Chromosome: chr07 Position: 14414551 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
|---|---|---|---|
| All | 1410 | 94.18% | 5.82% |
| All Indica | 792 | 95.33% | 4.67% |
| All Japonica | 496 | 95.77% | 4.23% |
| Aus | 66 | 86.36% | 13.64% |
| Indica I | 373 | 97.59% | 2.41% |
| Indica II | 209 | 94.26% | 5.74% |
| Indica Intermediate | 210 | 92.38% | 7.62% |
| Temperate Japonica | 335 | 96.12% | 3.88% |
| Tropical Japonica | 94 | 95.74% | 4.26% |
| Japonica Intermediate | 67 | 94.03% | 5.97% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714414551 | A->C | INTERGENIC | None |