Detailed information of SNP:
|
SNP ID:
sf0714747942(Gbrowse)
Chromosome: chr07 Position: 14747942 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1331 | 96.62% | 3.38% |
| All Indica | 716 | 93.72% | 6.28% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 351 | 91.45% | 8.55% |
| Indica II | 169 | 99.41% | 0.59% |
| Indica Intermediate | 196 | 92.86% | 7.14% |
| Temperate Japonica | 333 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714747942 | C->G | INTERGENIC | None |