Detailed information of SNP:
|
SNP ID:
sf0714894109(Gbrowse)
Chromosome: chr07 Position: 14894109 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1369 | 87.80% | 12.20% |
| All Indica | 753 | 80.08% | 19.92% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 63 | 84.13% | 15.87% |
| Indica I | 354 | 81.64% | 18.36% |
| Indica II | 198 | 72.73% | 27.27% |
| Indica Intermediate | 201 | 84.58% | 15.42% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714894109 | A->G | INTERGENIC | None |