Detailed information of SNP:
|
SNP ID:
sf0714952068(Gbrowse)
Chromosome: chr07 Position: 14952068 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1413 | 94.69% | 5.31% |
| All Indica | 795 | 96.73% | 3.27% |
| All Japonica | 497 | 91.95% | 8.05% |
| Aus | 65 | 87.69% | 12.31% |
| Indica I | 373 | 95.98% | 4.02% |
| Indica II | 212 | 96.23% | 3.77% |
| Indica Intermediate | 210 | 98.57% | 1.43% |
| Temperate Japonica | 335 | 88.06% | 11.94% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0714952068 | A->G | INTERGENIC | None |