Detailed information of SNP:
|
SNP ID:
sf0715007276(Gbrowse)
Chromosome: chr07 Position: 15007276 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 90.68% | 9.32% |
| All Indica | 798 | 89.35% | 10.65% |
| All Japonica | 497 | 91.35% | 8.65% |
| Aus | 66 | 93.94% | 6.06% |
| Indica I | 374 | 89.84% | 10.16% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 77.73% | 22.27% |
| Temperate Japonica | 335 | 87.16% | 12.84% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0715007276 | A->G | INTERGENIC | None |