Detailed information of SNP:
|
SNP ID:
sf0715026156(Gbrowse)
Chromosome: chr07 Position: 15026156 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 59.84% | 40.16% |
| All Indica | 797 | 31.37% | 68.63% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 373 | 29.49% | 70.51% |
| Indica II | 213 | 17.37% | 82.63% |
| Indica Intermediate | 211 | 48.82% | 51.18% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 73.81% | 26.19% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0715026156 | G->A | INTERGENIC | None |