Detailed information of SNP:
|
SNP ID:
sf0715706032(Gbrowse)
Chromosome: chr07 Position: 15706032 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 96.05% | 3.95% |
| All Indica | 799 | 99.25% | 0.75% |
| All Japonica | 470 | 92.34% | 7.66% |
| Aus | 67 | 83.58% | 16.42% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 317 | 91.17% | 8.83% |
| Tropical Japonica | 89 | 93.26% | 6.74% |
| Japonica Intermediate | 64 | 96.88% | 3.12% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0715706032 | G->A | INTERGENIC | None |