Detailed information of SNP:
|
SNP ID:
sf0715881836(Gbrowse)
Chromosome: chr07 Position: 15881836 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1401 | 96.50% | 3.50% |
| All Indica | 795 | 100.00% | 0.00% |
| All Japonica | 484 | 92.36% | 7.64% |
| Aus | 66 | 86.36% | 13.64% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 208 | 100.00% | 0.00% |
| Temperate Japonica | 328 | 98.48% | 1.52% |
| Tropical Japonica | 92 | 70.65% | 29.35% |
| Japonica Intermediate | 64 | 92.19% | 7.81% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0715881836 | G->A | INTERGENIC | None |